Small World Explorations, Micro GigaPan Applications and Example Enabling New Science
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Micro GigaPan Applications and Examples
Enabling New Science


The potential community of applications for using Micro GigaPan imaging is enormous... virtually every discipline from systematics to community ecology uses information from objects, such that advances in imaging technology for such objects becomes an immediate research asset.

More important, the online efficiency of GigaPan for user-viewing and exploration of images is trans-formative to image sharing in general, and as it becomes the norm, and not the exception, will both improve and accelerate use of GigaPan-generated imaging that is both cost-effective and speed-efficient.

This is the way that digital virtualization of biological specimens will be stored and shared on the Web, an incredibly vast atlas of form and implied function, most of which is unseen and unexplored by any human being...ripe for discovery, description, hypothesis testing, and new syntheses aiding the advancement of research and education.

Below are a few example applications of how Micro GigaPan is already being used to enable new science and expand our knowledge...

Biological Research Applications & Examples
Carnegie Museum of Natural History

Existing imaging devices give only a glimpse of the full range of information available in a specimen. Imagery from high magnification microscopes only provide a small portion of the subject in focus at any given moment. SEM (scanning electron microscopy) devices provide a higher depth of field and focus but are not able to image the entire subject area at full magnifications. Researchers are challenged with the choice between imaging a small localized area in great detail or imaging the whole specimen without the benefit of the microscopic detail.

At institutions such as the Carnegie Museum of Natural History, this challenge is even greater when combined with the task of analyzing surface features, conducting comparison studies, archiving, and providing open access to the millions of specimens in their collection. Across a wide-range of biology disciplines, these basic fundamental challenges are barriers to key research and discovery.

Below are examples of biological specimens that have been imaged during the development, prototyping, and testing phase...

Lepidoptera Test Specimen

This test specimen was imaged by Gene Cooper with the Micro GigaPan Imager prototype. The purpose of the test was to examine the potential and capabilities of layering multiple images to conduct comparisons of ventral and dorsal views.

Click Here to View Full Size Interactive Version and explore BOTH the dorsal and ventral views of the specimen


Siphonaptera Test Specimen
Click Here to View Full Size Interactive Version in New Window

Cicindelidae Test Specimen
This test specimen was imaged by Gene Cooper with the Micro GigaPan Imager prototype. The purpose of the test was to employ new lighting techniques to capture the full spectrum of specular and diffuse reflectivity in the specimen.

Click Here to View Fullscreen Version in New Window


Biological Medical Imaging Applications

The bio-application of gigapixel imaging is a no-brainer, as it allows one to effectively combine - in one and the same image - large-scale overview and high-resolution detail, covering a 'zoom-range' of 10-3 to 10-5 orders of magnitude.

That is a range where 'added quantity transforms into a new quality' (a bit like when you steadily add heat to a water kettle, and at some point fluid turns into vapor), as you can now observe general features - say of a tissue histology section - and zoom in to the cellular detail of an area of interest - say to detect heart disease development. If you wanted to do this by simply looking at high-resolution snippets, one at a time, you would more often than not miss the needle in the hay-stack. In our digital age, this is essentially bringing us 'back to the future', as good old analogue photography did have this spatial range built in (although we were largely unable to tap into this potential because of the workload involved).

Nowadays, we use digital displays and are accustomed to seeing a few megapixels at best (so we do not even know what we are missing). Being able to use giga-pixel technologies is going to revolutionize bio-medical research and diagnostics in pretty much the same way that modern world-to-street-view mapping tools have now become an everyday occurrence for locating other areas of interest - say a hotel or restaurant when you are in unfamiliar territory. So - this whole development is far from being an exercise in 'the more the merrier'. Instead, it lays the seeds for a revolution in digital image information capture, storage, access, and processing."

--Peter Kohl, British Heart Foundation, Oxford University


This test specimen below was imaged by Jay Longson with the Micro GigaPan enabled Scanning Electron Microscope. The low resolution test was conducted to examine the single heart cells from young female New Zealand white rabbit. Specimen provided by the British Heart Foundation.

Click Here to View Fullscreen Version in New Window




Honey Bee Research Example
Collapsed Bee Colony

1.9 Gigapixel image (1,900 Megapixels)
constructed from 12,240 images


This test specimen was imaged by Gene Cooper using the latest prototype of the Micro GigaPan Imager. The purpose of the test is to test new lighting techniques to illuminate and capture the full depth and detail of each cell from a collapsed honey bee colony frame. The honey bee frame was provided by Dennis vanEnglesdorp at Penn State University.

Use the GigaPan viewer below to explore the full resolution of the specimen.

Click Here to View Fullscreen Version in New Window


Scanning Electron Microscope Example
Ant Speciment

280 Megapixel image
constructed from 400 images


This test specimen was imaged by Molly Gibson using a the Micro GigaPan enabled SEM microscope, made possible by the NanoGigaPan adaptation device.

The ant is from Madagascar, and is named Eutetramorium mocquerysi. The species is notable for having wingless queens that are indistinguishable from workers. This image is composed of 400 pictures, and it's magnified 400x using a scanning electron microscope. The ant was given to us to image by Brian Fisher (http://www.calacademy.org/science/heroes/bfisher/) an entomologist at the California Academy of Sciences.

Use the GigaPan viewer below to explore the full resolution of the specimen.

Click Here to View Fullscreen Version in New Window


Materials Analysis Example
Test Penny with Micro GigaPan Enabled Microscope

600 Megapixel image

This test subject was imaged by Jay Longson with the Micro GigaPan enabled Leica microscope. The purpose of image was to test the software that enables the microscope to take photographs in three axes of movement (x, y, z).

Use the GigaPan viewer below to explore the full resolution of the specimen.

Click Here to View Fullscreen Version in New Window


Document Archiving / Analysis Example
Two Dollar Bill

8.5 Gigapixel image (8,500 Megapixels)
constructed from 1800 images


This test subject was imaged by Gene Cooper with an early iteration of the Micro GigaPan Imager prototype. The purpose of image was to test the resolution potential of imaging documents for the purposes of both archiving and analysis. One of many benefits here is the extreme resolution that is possible and ability to image the subject without flattening it (such as with a scanning technology) or touching the object.

Use the GigaPan viewer below to explore the full resolution of the specimen.

Click Here to View Fullscreen Version in New Window

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